MLOC_49768 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.000894.683184.187010
LEAShoots from the seedlings (10 cm shoot stage)14.416510.986613.30840
INF1Young developing inflorescences (5mm)4.982752.992742.327960
INF2Developing inflorescences (1-1.5 cm)3.280853.377515.751130
ROORoots from the seedlings (10 cm shoot stage)6.619516.999274.963970
NODDeveloping tillers at six leaf stage, 3rd internode5.361397.8503514.25920
CAR5Developing grain, bracts removed (5 DPA)4.579893.373973.766380
CAR15Developing grain, bracts removed (15 DPA)1.492861.326870.6438730



CDS Structure of MLOC_49768






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354319
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354319CUST_19354_PI427708080NoneNoneNone
MLOC_28148.1NoneAvailableNonecontig_189545 (Mapped)
MLOC_30289.1NoneAvailableNonecontig_2081103 (Not mapped)
MLOC_35977.1NoneAvailableNonecontig_2528662 (Not mapped)
MLOC_41749.1NoneAvailableNonecontig_2604127 (Not mapped)
MLOC_49768.1NoneAvailableNonecontig_348032 (Mapped)
MLOC_78345.1NoneAvailableAvailablecontig_7977 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----