- Predicted Gene MLOC_49760
MLOC_49760 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.83859 | 5.31953 | 5.70733 | 4.43224 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0554 | 8.06372 | 7.30973 | 7.45855 |
| INF1 | Young developing inflorescences (5mm) | 8.92699 | 12.3056 | 13.1951 | 7.86969 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.49599 | 9.85141 | 7.46932 | 8.63249 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.23824 | 6.07123 | 5.7855 | 6.56857 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.672 | 15.8069 | 16.0022 | 42.6229 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.13712 | 10.183 | 7.87909 | 7.63231 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.84267 | 0.762267 | 3.86019 | 3.59323 |
CDS Structure of MLOC_49760
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49760.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g36465.1 |
+3 |
1e-21 |
85 |
40/58 (69%) |
13107.m24453 protein vacuolar ATP synthase subunit H, putative, expressed |
| TAIR PP10 |
AT3G42050.1 |
+3 |
4e-15 |
71 |
34/56 (61%) |
vacuolar ATP synthase subunit H family protein | chr3:14228846-14232228 REVERSE LENGTH=441 |