MLOC_49758 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains732.493720.578794.1230
LEAShoots from the seedlings (10 cm shoot stage)345.498379.346248.2340
INF1Young developing inflorescences (5mm)471.522485.114477.7970
INF2Developing inflorescences (1-1.5 cm)205.029190.64169.3610
ROORoots from the seedlings (10 cm shoot stage)478.979356.407492.3410
NODDeveloping tillers at six leaf stage, 3rd internode383.96779.8557150.6530
CAR5Developing grain, bracts removed (5 DPA)303.567264.953313.7090
CAR15Developing grain, bracts removed (15 DPA)158.12142.829137.5040



CDS Structure of MLOC_49758






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358923
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358923CUST_20038_PI427708080NoneNoneNone
MLOC_29232.1NoneAvailableNonecontig_198633 (Mapped)
MLOC_31792.1NoneAvailableAvailablecontig_222347 (Mapped)
MLOC_49758.1NoneAvailableNonecontig_347822 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----