MLOC_49709 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.740316.012113.32710.4925
LEAShoots from the seedlings (10 cm shoot stage)14.733312.369418.638410.0585
INF1Young developing inflorescences (5mm)11.946415.945317.34959.71429
INF2Developing inflorescences (1-1.5 cm)19.221814.263215.402314.8875
ROORoots from the seedlings (10 cm shoot stage)25.848914.845511.77815.2619
NODDeveloping tillers at six leaf stage, 3rd internode7.3880211.2928.2276823.0565
CAR5Developing grain, bracts removed (5 DPA)17.246114.308620.076313.3618
CAR15Developing grain, bracts removed (15 DPA)8.062974.618655.7439211.7543



CDS Structure of MLOC_49709






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374748
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374748CUST_25911_PI427708080NoneNoneNone
MLOC_49709.1NoneAvailableAvailablecontig_346686 (Mapped)
MLOC_52654.1NoneAvailableNonecontig_376853 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----