- Predicted Gene MLOC_49701
MLOC_49701 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_49701_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_49701_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.96253 | 18.5107 | 15.6721 | 14.0733 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.4807 | 10.1317 | 11.8056 | 9.74064 |
INF1 | Young developing inflorescences (5mm) | 35.2868 | 32.6012 | 25.1853 | 25.2436 |
INF2 | Developing inflorescences (1-1.5 cm) | 34.0459 | 37.7312 | 31.4461 | 36.0764 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.6828 | 16.0171 | 11.9069 | 15.8632 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.03947 | 3.31646 | 5.35591 | 11.0357 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.4615 | 23.6865 | 24.6499 | 22.243 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.81098 | 5.12297 | 4.61416 | 11.6645 |
CDS Structure of MLOC_49701
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49701.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g40600.1 |
-3 |
0.0 |
1261 |
643/688 (93%) |
13106.m04222 protein elongation factor, putative, expressed |
TAIR PP10 |
AT1G06220.1 |
-3 |
0.0 |
1065 |
531/688 (77%) |
| Symbols: MEE5, CLO, GFA1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:1900524-1904583 FORWARD LENGTH=987 |