MLOC_4966 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 32.2037 | 58.6713 | 49.9293 | 47.3359 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.4919 | 23.1917 | 23.4195 | 23.7134 |
| INF1 | Young developing inflorescences (5mm) | 121.389 | 114.933 | 118.371 | 93.6557 |
| INF2 | Developing inflorescences (1-1.5 cm) | 107.179 | 111.42 | 102.342 | 112.227 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.4399 | 50.3914 | 41.9041 | 51.8986 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.77488 | 3.83575 | 11.5604 | 15.9656 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 69.9108 | 64.4131 | 69.0805 | 62.0403 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 35.2082 | 32.9836 | 28.3479 | 70.9642 |
CDS Structure of MLOC_4966
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4966.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g43760.1 |
+2 |
0.0 |
2128 |
1044/1193 (88%) |
13106.m04586 protein tRNA synthetase class I, putative, expressed |
| TAIR PP10 |
AT4G10320.1 |
+2 |
0.0 |
1642 |
807/1213 (67%) |
tRNA synthetase class I (I, L, M and V) family protein | chr4:6397526-6404509 REVERSE LENGTH=1190 |
