- Predicted Gene MLOC_49625
MLOC_49625 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.61406 | 23.0256 | 19.8002 | 16.1613 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.9495 | 15.4463 | 16.6936 | 15.376 |
| INF1 | Young developing inflorescences (5mm) | 53.3345 | 55.231 | 52.3632 | 39.1449 |
| INF2 | Developing inflorescences (1-1.5 cm) | 69.291 | 63.8895 | 59.374 | 62.7494 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.85611 | 18.881 | 15.6225 | 17.7906 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.965 | 26.1849 | 31.2937 | 82.263 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.7035 | 25.4216 | 28.1863 | 22.6317 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.75436 | 7.6257 | 7.64092 | 15.1139 |
CDS Structure of MLOC_49625
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49625.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g32340.1 |
+1 |
0.0 |
820 |
416/563 (74%) |
13102.m03495 protein Spc97 / Spc98 family protein, putative, expressed |
| TAIR PP10 |
AT1G80260.1 |
+1 |
6e-136 |
374 |
228/567 (40%) |
| Symbols: emb1427 | Spc97 / Spc98 family of spindle pole body (SBP) component | chr1:30175924-30180511 FORWARD LENGTH=995 |