- Predicted Gene MLOC_49603
MLOC_49603 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_49603_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_49603_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 22.9045 | 32.4812 | 31.3368 | 29.5531 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.7134 | 16.0348 | 15.5645 | 13.5758 |
INF1 | Young developing inflorescences (5mm) | 37.1777 | 36.9875 | 38.9906 | 32.3328 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.9672 | 34.3389 | 23.1613 | 30.5831 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.9396 | 21.267 | 18.1367 | 22.639 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.69355 | 4.38277 | 11.0385 | 16.6591 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.5662 | 30.8723 | 30.8717 | 29.5393 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.48336 | 5.01713 | 4.85393 | 12.2877 |
CDS Structure of MLOC_49603
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49603.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g24354.1 |
-3 |
8e-150 |
444 |
234/277 (84%) |
13102.m02639 protein pyridoxal-dependent decarboxylase protein, putative, expressed |
TAIR PP10 |
AT3G14390.1 |
-3 |
5e-110 |
341 |
157/208 (75%) |
Pyridoxal-dependent decarboxylase family protein | chr3:4806771-4808954 FORWARD LENGTH=484 |