MLOC_49570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.310280.6990440.1886250.523005
LEAShoots from the seedlings (10 cm shoot stage)0.22171700.4772290.328591
INF1Young developing inflorescences (5mm)1.222060.6257881.270710.954718
INF2Developing inflorescences (1-1.5 cm)0.7579570.7177251.197091.09587
ROORoots from the seedlings (10 cm shoot stage)00.6484240.3915261.10883
NODDeveloping tillers at six leaf stage, 3rd internode000.1487530.372753
CAR5Developing grain, bracts removed (5 DPA)0.2728480.1268490.1354250.186111
CAR15Developing grain, bracts removed (15 DPA)0.107652000.380558



CDS Structure of MLOC_49570






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49570.1CUST_7021_PI427708083AvailableAvailablecontig_344232 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58300.1 +2 8e-44 151 80/122 (66%) 13102.m06753 protein expressed protein
TAIR PP10None-----