MLOC_49567 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8400610.4925690.789260.605193
LEAShoots from the seedlings (10 cm shoot stage)0.808810.1999240.4417230.38553
INF1Young developing inflorescences (5mm)2.331842.948173.025712.19282
INF2Developing inflorescences (1-1.5 cm)2.907253.069463.062093.0891
ROORoots from the seedlings (10 cm shoot stage)1.400291.264940.9213581.27345
NODDeveloping tillers at six leaf stage, 3rd internode0.2135530.2109040.4858170.680604
CAR5Developing grain, bracts removed (5 DPA)2.637983.159943.118922.69262
CAR15Developing grain, bracts removed (15 DPA)0.6077820.4118460.5643581.22889



CDS Structure of MLOC_49567






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49567.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49567.1CUST_17705_PI427708080AvailableAvailablecontig_344080 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08620.1 -3 5e-109 336 159/253 (63%) 13109.m00725 protein OsFBX309 - F-box domain containing protein, expressed
TAIR PP10None-----