MLOC_49564 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.200690.6369570
LEAShoots from the seedlings (10 cm shoot stage)03.0332800
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.85699300
ROORoots from the seedlings (10 cm shoot stage)00.8678411.447080
NODDeveloping tillers at six leaf stage, 3rd internode0.3687540.5020940.2975650
CAR5Developing grain, bracts removed (5 DPA)2.154561.515920.4705890
CAR15Developing grain, bracts removed (15 DPA)1.337841.825173.323710



CDS Structure of MLOC_49564






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK374526
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374526CUST_14396_PI427708083NoneNoneNone
MLOC_28282.1NoneAvailableNonecontig_1906210 (Not mapped)
MLOC_30049.1NoneAvailableAvailablecontig_205986 (Not mapped)
MLOC_47409.1NoneAvailableNonecontig_305531 (Mapped)
MLOC_49564.1NoneAvailableNonecontig_344037 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----