MLOC_49530 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.539541.35910.8688160
LEAShoots from the seedlings (10 cm shoot stage)2.547671.041340.4256260
INF1Young developing inflorescences (5mm)1.964862.258372.45180
INF2Developing inflorescences (1-1.5 cm)0.6595822.255872.329860
ROORoots from the seedlings (10 cm shoot stage)000.9674630
NODDeveloping tillers at six leaf stage, 3rd internode02.894451.360960
CAR5Developing grain, bracts removed (5 DPA)0.5639891.258331.54480
CAR15Developing grain, bracts removed (15 DPA)0.3105570.31863600



CDS Structure of MLOC_49530






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355158
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355158CUST_14008_PI427708083NoneNoneNone
MLOC_29466.1NoneAvailableNonecontig_200835 (Mapped)
MLOC_31899.1NoneAvailableNonecontig_2233361 (Not mapped)
MLOC_46847.1NoneAvailableAvailablecontig_296599 (Mapped)
MLOC_49107.1NoneAvailableNonecontig_335687 (Mapped)
MLOC_49530.1NoneAvailableNonecontig_343198 (Not mapped)
MLOC_50270.1NoneAvailableNonecontig_357847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----