MLOC_49476 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.919111.726216.15970
LEAShoots from the seedlings (10 cm shoot stage)37.373965.907538.76850
INF1Young developing inflorescences (5mm)20.479427.026735.88750
INF2Developing inflorescences (1-1.5 cm)21.359123.131931.99510
ROORoots from the seedlings (10 cm shoot stage)5.8900512.478224.69970
NODDeveloping tillers at six leaf stage, 3rd internode31.330812.77318.74630
CAR5Developing grain, bracts removed (5 DPA)41.550743.02936.02880
CAR15Developing grain, bracts removed (15 DPA)13.33129.7951412.48850



CDS Structure of MLOC_49476






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358922
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358922CUST_24177_PI427708080NoneNoneNone
MLOC_30707.5NoneAvailableNonecontig_212011 (Mapped)
MLOC_35880.1NoneAvailableNonecontig_2524843 (Not mapped)
MLOC_40355.1NoneAvailableAvailablecontig_2558617 (Not mapped)
MLOC_49476.1NoneAvailableNonecontig_342338 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----