- Predicted Gene MLOC_49417
MLOC_49417 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_49417_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_49417_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 52.7994 | 41.6038 | 34.8238 | 47.3965 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.9997 | 0.255602 | 2.21752 | 5.60227 |
INF1 | Young developing inflorescences (5mm) | 105.396 | 99.9172 | 107.486 | 103.319 |
INF2 | Developing inflorescences (1-1.5 cm) | 67.567 | 104.872 | 95.2694 | 119.945 |
ROO | Roots from the seedlings (10 cm shoot stage) | 20.6587 | 21.6617 | 36.5616 | 31.442 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.37035 | 0.308849 | 0.554928 | 1.19366 |
CAR5 | Developing grain, bracts removed (5 DPA) | 45.5192 | 49.6981 | 33.0361 | 50.122 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.85915 | 1.39963 | 3.32362 | 5.627 |
CDS Structure of MLOC_49417
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49417.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g05730.1 |
+2 |
2e-73 |
219 |
113/124 (91%) |
13111.m00557 protein histone H3, putative, expressed |
TAIR PP10 |
AT5G65360.1 |
+2 |
8e-74 |
219 |
113/124 (91%) |
Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136 |