MLOC_4941 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.79137.774376.174176.08292
LEAShoots from the seedlings (10 cm shoot stage)2.606930.2116430.4364230.974999
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.721455.240775.218875.77314
NODDeveloping tillers at six leaf stage, 3rd internode7.919133.30090.03170278.44402
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_4941






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4941.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4941.2CUST_6988_PI427708083AvailableAvailablecontig_135695 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g48450.1 -1 2e-70 226 113/162 (70%) 13102.m05478 protein xylem cysteine proteinase 2 precursor, putative, expressed
TAIR PP10 AT4G35350.2 -1 9e-38 138 68/129 (53%) | Symbols: XCP1 | xylem cysteine peptidase 1 | chr4:16810529-16811578 FORWARD LENGTH=288