MLOC_4941 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4941_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4941_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.7913 | 7.77437 | 6.17417 | 6.08292 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.60693 | 0.211643 | 0.436423 | 0.974999 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.72145 | 5.24077 | 5.21887 | 5.77314 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.91913 | 3.3009 | 0.0317027 | 8.44402 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_4941
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4941.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g48450.1 |
-1 |
2e-70 |
226 |
113/162 (70%) |
13102.m05478 protein xylem cysteine proteinase 2 precursor, putative, expressed |
TAIR PP10 |
AT4G35350.2 |
-1 |
9e-38 |
138 |
68/129 (53%) |
| Symbols: XCP1 | xylem cysteine peptidase 1 | chr4:16810529-16811578 FORWARD LENGTH=288 |