MLOC_49390 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8319420.4907130.3603710
LEAShoots from the seedlings (10 cm shoot stage)0.8623311.806221.151360
INF1Young developing inflorescences (5mm)1.161340.7097191.404440
INF2Developing inflorescences (1-1.5 cm)1.236723.703151.846560
ROORoots from the seedlings (10 cm shoot stage)0.484761000
NODDeveloping tillers at six leaf stage, 3rd internode1.736252.074891.03410
CAR5Developing grain, bracts removed (5 DPA)1.028760.9239340.7890330
CAR15Developing grain, bracts removed (15 DPA)0.6525590.6927250.6509540



CDS Structure of MLOC_49390






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248142.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248142.1CUST_18509_PI427708080NoneNoneNone
MLOC_1364.1NoneAvailableNonecontig_111956 (Mapped)
MLOC_16299.5NoneAvailableAvailablecontig_157299 (Mapped)
MLOC_48269.1NoneAvailableNonecontig_320422 (Mapped)
MLOC_49390.1NoneAvailableNonecontig_340818 (Mapped)
MLOC_62357.1NoneAvailableNonecontig_464852 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----