MLOC_49358 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.9441610.72999.909548.86598
LEAShoots from the seedlings (10 cm shoot stage)12.324711.33217.36078.00013
INF1Young developing inflorescences (5mm)20.690121.589523.364617.2753
INF2Developing inflorescences (1-1.5 cm)36.641730.629931.024533.4237
ROORoots from the seedlings (10 cm shoot stage)12.40814.400418.179314.3852
NODDeveloping tillers at six leaf stage, 3rd internode8.808726.610399.8135120.1206
CAR5Developing grain, bracts removed (5 DPA)20.461223.757622.390319.0858
CAR15Developing grain, bracts removed (15 DPA)13.931311.334212.289827.9486



CDS Structure of MLOC_49358






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49358.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49358.1CUST_17704_PI427708080AvailableAvailablecontig_340308 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43080.1 +2 3e-78 247 124/177 (70%) 13101.m04442 protein exonuclease, putative, expressed
TAIR PP10None-----