MLOC_49352 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.634618.319634.26770
LEAShoots from the seedlings (10 cm shoot stage)44.245748.541290.04270
INF1Young developing inflorescences (5mm)3.73728.289329.565090
INF2Developing inflorescences (1-1.5 cm)1.923192.366964.27170
ROORoots from the seedlings (10 cm shoot stage)44.532113.45715.92180
NODDeveloping tillers at six leaf stage, 3rd internode27.8538.862328.34630
CAR5Developing grain, bracts removed (5 DPA)01.425650.833840
CAR15Developing grain, bracts removed (15 DPA)0.8150020.8768071.256750



CDS Structure of MLOC_49352






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248906.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248906.1CUST_18623_PI427708080NoneNoneNone
MLOC_31971.4NoneAvailableNonecontig_223946 (Mapped)
MLOC_32109.3NoneAvailableNonecontig_225323 (Mapped)
MLOC_47339.1NoneAvailableNonecontig_304414 (Mapped)
MLOC_48158.1NoneAvailableNonecontig_318621 (Mapped)
MLOC_49352.1NoneAvailableNonecontig_340230 (Mapped)
MLOC_56781.1NoneAvailableNonecontig_411449 (Not mapped)
MLOC_74541.1NoneAvailableAvailablecontig_66062 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----