MLOC_49342 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.124460.6986621.085820.946549
LEAShoots from the seedlings (10 cm shoot stage)3.382970.2600071.265491.64414
INF1Young developing inflorescences (5mm)1.124051.259871.601651.07608
INF2Developing inflorescences (1-1.5 cm)0.9719640.9738172.506431.40539
ROORoots from the seedlings (10 cm shoot stage)0.5045540.6978241.404330.995102
NODDeveloping tillers at six leaf stage, 3rd internode0.8478860.9254270.3905282.9594
CAR5Developing grain, bracts removed (5 DPA)0.6961630.9998031.651371.11511
CAR15Developing grain, bracts removed (15 DPA)0.1388490.2879360.8359690.800792



CDS Structure of MLOC_49342






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49342.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49342.1CUST_6977_PI427708083AvailableAvailablecontig_340070 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g14590.1 -3 1e-11 61 29/36 (81%) 13105.m01535 protein MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed
TAIR PP10None-----