MLOC_4933 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.06841010.061968900.0384131
CAR15Developing grain, bracts removed (15 DPA)0.2502690.07821210.02019070.258825



CDS Structure of MLOC_4933






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4933.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4933.3CUST_17703_PI427708080AvailableAvailablecontig_135682 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g25280.1 +3 3e-48 169 84/194 (43%) 13109.m02416 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----