MLOC_49314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains96.062698.536483.927798.9178
LEAShoots from the seedlings (10 cm shoot stage)92.9666189.787228.385148.738
INF1Young developing inflorescences (5mm)0.4745660.6781941.014850.644002
INF2Developing inflorescences (1-1.5 cm)0.6443010.1630780.935050.564646
ROORoots from the seedlings (10 cm shoot stage)74.428359.573978.489278.8564
NODDeveloping tillers at six leaf stage, 3rd internode14.26612.016589.893980.5114
CAR5Developing grain, bracts removed (5 DPA)0.578610.4110350.2807320.436519
CAR15Developing grain, bracts removed (15 DPA)0.2086410.06535160.2630850.415251



CDS Structure of MLOC_49314






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359004NoneNoneNoneNone
MLOC_49314.1NoneAvailableAvailablecontig_339420 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g27260.1 -2 2e-96 294 145/220 (66%) 13101.m02835 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT3G62760.1 -2 2e-59 197 99/209 (47%) | Symbols: ATGSTF13 | Glutathione S-transferase family protein | chr3:23217425-23218246 REVERSE LENGTH=219