MLOC_49306 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4958980.8330380.6257840
LEAShoots from the seedlings (10 cm shoot stage)00.7498480.3399120
INF1Young developing inflorescences (5mm)0.3936561.433152.874710
INF2Developing inflorescences (1-1.5 cm)2.105313.020683.910720
ROORoots from the seedlings (10 cm shoot stage)001.33120
NODDeveloping tillers at six leaf stage, 3rd internode0.1706330.6553820.3791890
CAR5Developing grain, bracts removed (5 DPA)0.7002810.6344110.7103740
CAR15Developing grain, bracts removed (15 DPA)00.1980930.2781530



CDS Structure of MLOC_49306






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK357617
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357617CUST_13648_PI427708083NoneNoneNone
MLOC_1559.2NoneAvailableAvailablecontig_113740 (Mapped)
MLOC_27161.1NoneAvailableNonecontig_181068 (Mapped)
MLOC_46275.2NoneAvailableNonecontig_287886 (Not mapped)
MLOC_49306.1NoneAvailableNonecontig_339312 (Not mapped)
MLOC_52417.1NoneAvailableNonecontig_375175 (Mapped)
MLOC_52953.1NoneAvailableNonecontig_379334 (Mapped)
MLOC_69541.2NoneAvailableNonecontig_56586 (Mapped)
MLOC_81547.1NoneAvailableNonecontig_969141 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----