MLOC_49293 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8154930.4776280.7286270.577664
LEAShoots from the seedlings (10 cm shoot stage)0.8772350.4468671.476620.753853
INF1Young developing inflorescences (5mm)1.221741.212941.459680.936667
INF2Developing inflorescences (1-1.5 cm)0.3912831.809670.7776061.08701
ROORoots from the seedlings (10 cm shoot stage)1.84730.2612921.640920.793533
NODDeveloping tillers at six leaf stage, 3rd internode1.049022.272190.9102916.01633
CAR5Developing grain, bracts removed (5 DPA)0.2477150.667330.8069490.46554
CAR15Developing grain, bracts removed (15 DPA)0.249160.26260800.703016



CDS Structure of MLOC_49293






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49293.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49293.1CUST_4522_PI427708086AvailableAvailablecontig_339159 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----