- Predicted Gene MLOC_49275
MLOC_49275 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_49275_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_49275_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.52641 | 0.442516 | 4.05847 | 2.25224 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.57319 | 1.58 | 3.58802 | 3.40162 |
INF1 | Young developing inflorescences (5mm) | 1.26714 | 1.2545 | 2.0312 | 1.48535 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.53103 | 1.01005 | 1.01833 | 1.57309 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.68583 | 1.94093 | 4.49811 | 3.67529 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.67156 | 7.16687 | 1.72824 | 26.3397 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.46132 | 2.61668 | 2.51599 | 2.35026 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.447649 | 0 | 2.26699 |
CDS Structure of MLOC_49275
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49275.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g65720.1 |
-1 |
4e-30 |
112 |
49/63 (78%) |
13101.m07105 protein expressed protein |
TAIR PP10 |
AT5G67540.1 |
-1 |
3e-22 |
89 |
39/64 (61%) |
Arabinanase/levansucrase/invertase | chr5:26944253-26946058 REVERSE LENGTH=466 |