MLOC_49185 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)000.2708040
INF1Young developing inflorescences (5mm)0.340059000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.327011000
NODDeveloping tillers at six leaf stage, 3rd internode0.2909990.1640612.669050
CAR5Developing grain, bracts removed (5 DPA)0.142590.40371900
CAR15Developing grain, bracts removed (15 DPA)0.193986000



CDS Structure of MLOC_49185






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361755
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361755CUST_20421_PI427708080NoneNoneNone
MLOC_20540.1NoneAvailableNonecontig_1590432 (Not mapped)
MLOC_35717.1NoneAvailableNonecontig_2518818 (Not mapped)
MLOC_42301.1NoneAvailableNonecontig_263633 (Mapped)
MLOC_49185.1NoneAvailableNonecontig_337354 (Not mapped)
MLOC_70804.1NoneAvailableAvailablecontig_58579 (Mapped)
MLOC_9411.1NoneAvailableNonecontig_1520811 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----