MLOC_49182 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains698.194412.345432.263482.444
LEAShoots from the seedlings (10 cm shoot stage)367.336252.559333.216264.348
INF1Young developing inflorescences (5mm)690.314770.762886.987645.927
INF2Developing inflorescences (1-1.5 cm)957.215720.543950.388932.44
ROORoots from the seedlings (10 cm shoot stage)918.649609.218607.831764.328
NODDeveloping tillers at six leaf stage, 3rd internode176.9288.294482.5031019.83
CAR5Developing grain, bracts removed (5 DPA)491.054541.212530.77511.581
CAR15Developing grain, bracts removed (15 DPA)352.423345.776365.269815.716



CDS Structure of MLOC_49182






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252297.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252297.1CUST_23524_PI427708080NoneNoneNone
MLOC_49182.1NoneAvailableAvailablecontig_337273 (Mapped)
MLOC_4930.1NoneAvailableNonecontig_135680 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----