- Predicted Gene MLOC_49178
MLOC_49178 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.80637 | 7.72381 | 7.87478 | 5.46826 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.42879 | 3.17825 | 5.55961 | 2.94023 |
| INF1 | Young developing inflorescences (5mm) | 12.4103 | 11.1822 | 9.28345 | 6.67551 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.27081 | 7.41672 | 9.03254 | 6.43245 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.94062 | 7.13143 | 10.9263 | 5.47294 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.127733 | 0.184015 | 0.853818 | 0.637851 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.47711 | 6.23273 | 6.17274 | 4.17323 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.19414 | 2.71024 | 2.17602 | 3.73817 |
CDS Structure of MLOC_49178
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49178.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g54870.1 |
-2 |
6e-72 |
234 |
119/148 (80%) |
13101.m05767 protein 60S ribosomal protein L18a, putative, expressed |
| TAIR PP10 |
AT1G29965.1 |
-2 |
6e-64 |
217 |
110/146 (75%) |
Ribosomal protein L18ae/LX family protein | chr1:10498458-10499373 REVERSE LENGTH=178 |