MLOC_49171 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.7094229.719113.74540
LEAShoots from the seedlings (10 cm shoot stage)24.391429.951123.87840
INF1Young developing inflorescences (5mm)41.291432.001968.05810
INF2Developing inflorescences (1-1.5 cm)43.907144.952560.21580
ROORoots from the seedlings (10 cm shoot stage)11.157235.293945.36730
NODDeveloping tillers at six leaf stage, 3rd internode12.789941.529323.14650
CAR5Developing grain, bracts removed (5 DPA)16.17115.750214.35630
CAR15Developing grain, bracts removed (15 DPA)4.054975.540743.014640



CDS Structure of MLOC_49171






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369867
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369867CUST_25385_PI427708080NoneNoneNone
MLOC_41377.1NoneAvailableNonecontig_2585918 (Not mapped)
MLOC_48483.1NoneAvailableNonecontig_324459 (Not mapped)
MLOC_49171.1NoneAvailableNonecontig_336967 (Not mapped)
MLOC_69612.1NoneAvailableAvailablecontig_56694 (Mapped)
MLOC_79021.1NoneAvailableNonecontig_8302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----