MLOC_49145 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.953572.399444.835891.99137
LEAShoots from the seedlings (10 cm shoot stage)8.00067.2989214.38454.6505
INF1Young developing inflorescences (5mm)6.244737.791698.780243.424
INF2Developing inflorescences (1-1.5 cm)4.975035.006086.017223.79652
ROORoots from the seedlings (10 cm shoot stage)10.92126.9399110.38895.41869
NODDeveloping tillers at six leaf stage, 3rd internode15.990916.040818.606929.3065
CAR5Developing grain, bracts removed (5 DPA)1.301762.819262.435681.28148
CAR15Developing grain, bracts removed (15 DPA)0.60956302.255651.41717



CDS Structure of MLOC_49145






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK375984
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375984NoneNoneNoneNone
MLOC_23456.1NoneAvailableNonecontig_1623173 (Not mapped)
MLOC_47694.1NoneAvailableNonecontig_310631 (Not mapped)
MLOC_49145.1NoneAvailableAvailablecontig_336442 (Mapped)
MLOC_56973.1NoneAvailableNonecontig_41297 (Mapped)
MLOC_9284.1NoneAvailableNonecontig_150923 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----