MLOC_49107 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3582313.186715.15230
LEAShoots from the seedlings (10 cm shoot stage)18.53679.3268911.24490
INF1Young developing inflorescences (5mm)27.874824.066138.41280
INF2Developing inflorescences (1-1.5 cm)38.792229.74638.76560
ROORoots from the seedlings (10 cm shoot stage)5.828179.1064212.17260
NODDeveloping tillers at six leaf stage, 3rd internode15.129711.743719.0240
CAR5Developing grain, bracts removed (5 DPA)19.076118.746916.85790
CAR15Developing grain, bracts removed (15 DPA)8.227425.845748.930940



CDS Structure of MLOC_49107






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355158
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355158CUST_14008_PI427708083NoneNoneNone
MLOC_29466.1NoneAvailableNonecontig_200835 (Mapped)
MLOC_31899.1NoneAvailableNonecontig_2233361 (Not mapped)
MLOC_46847.1NoneAvailableAvailablecontig_296599 (Mapped)
MLOC_49107.1NoneAvailableNonecontig_335687 (Mapped)
MLOC_49530.1NoneAvailableNonecontig_343198 (Not mapped)
MLOC_50270.1NoneAvailableNonecontig_357847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----