MLOC_4910 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.358450.7159270.938230.908501
LEAShoots from the seedlings (10 cm shoot stage)0.9905550.1684370.5798680.492837
INF1Young developing inflorescences (5mm)1.33871.006831.097660.929408
INF2Developing inflorescences (1-1.5 cm)0.8606990.8065891.000580.787364
ROORoots from the seedlings (10 cm shoot stage)0.6282641.000140.5551630.989535
NODDeveloping tillers at six leaf stage, 3rd internode0.7678190.6909080.2277811.74674
CAR5Developing grain, bracts removed (5 DPA)3.759913.379263.597672.99227
CAR15Developing grain, bracts removed (15 DPA)4.683255.110065.5680410.8309



CDS Structure of MLOC_4910






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4910.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374903NoneNoneNoneNone
MLOC_4910.1NoneAvailableAvailablecontig_135651 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02880.1 -1 5e-102 315 150/187 (80%) 13112.m00237 protein E2F-related protein, putative, expressed
TAIR PP10 AT1G57610.2 -1 3e-68 226 106/170 (62%) Protein of unknown function (DUF607) | chr1:21337449-21338412 REVERSE LENGTH=293