MLOC_49084 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4178293.223981.668960
LEAShoots from the seedlings (10 cm shoot stage)2.662440.6691371.076050
INF1Young developing inflorescences (5mm)5.53627.670636.794240
INF2Developing inflorescences (1-1.5 cm)10.534711.26516.601130
ROORoots from the seedlings (10 cm shoot stage)2.793244.539351.266170
NODDeveloping tillers at six leaf stage, 3rd internode3.614565.447952.801090
CAR5Developing grain, bracts removed (5 DPA)3.935993.826312.75520
CAR15Developing grain, bracts removed (15 DPA)0.3729061.541791.136620



CDS Structure of MLOC_49084






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250764.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250764.1CUST_18903_PI427708080NoneNoneNone
MLOC_24724.1NoneAvailableNonecontig_16523 (Not mapped)
MLOC_32527.1NoneAvailableNonecontig_22940 (Not mapped)
MLOC_35928.1NoneAvailableNonecontig_252632 (Mapped)
MLOC_42130.1NoneAvailableNonecontig_2626256 (Not mapped)
MLOC_46449.1NoneAvailableNonecontig_29055 (Not mapped)
MLOC_4788.1NoneAvailableNonecontig_1355068 (Not mapped)
MLOC_49084.1NoneAvailableNonecontig_335269 (Not mapped)
MLOC_53879.1NoneAvailableNonecontig_387091 (Not mapped)
MLOC_62271.1NoneAvailableAvailablecontig_463687 (Mapped)
MLOC_62272.3NoneAvailableNonecontig_463687 (Mapped)
MLOC_68490.1NoneAvailableNonecontig_54866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----