MLOC_4908 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.76368 | 12.8492 | 15.1234 | 11.919 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.0493 | 3.52064 | 5.63008 | 7.74951 |
| INF1 | Young developing inflorescences (5mm) | 12.9891 | 11.1881 | 9.38433 | 9.27629 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.31865 | 10.3928 | 9.5075 | 10.4308 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.677685 | 3.44963 | 3.04959 | 3.51745 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.64456 | 2.92661 | 0.605755 | 8.637 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.0206 | 25.0297 | 24.8139 | 24.8761 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.178916 | 0.0975153 | 0.191897 | 0.343489 |
CDS Structure of MLOC_4908
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4908.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g03160.1 |
+1 |
0.0 |
978 |
483/630 (77%) |
13111.m00252 protein glycosyl transferase, family 8, putative, expressed |
| TAIR PP10 |
AT2G38650.2 |
+1 |
3e-167 |
505 |
282/640 (44%) |
| Symbols: GAUT7 | galacturonosyltransferase 7 | chr2:16161856-16165523 REVERSE LENGTH=619 |
