MLOC_49059 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.102733.037541.12130
LEAShoots from the seedlings (10 cm shoot stage)43.522831.634933.33390
INF1Young developing inflorescences (5mm)48.851949.644763.06050
INF2Developing inflorescences (1-1.5 cm)58.818838.145343.11780
ROORoots from the seedlings (10 cm shoot stage)38.550328.10234.90870
NODDeveloping tillers at six leaf stage, 3rd internode38.911137.002330.70590
CAR5Developing grain, bracts removed (5 DPA)25.580128.558431.50290
CAR15Developing grain, bracts removed (15 DPA)19.779821.071522.39320



CDS Structure of MLOC_49059






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366111
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366111CUST_21235_PI427708080NoneNoneNone
MLOC_10864.1NoneAvailableNonecontig_155995 (Mapped)
MLOC_25248.1NoneAvailableNonecontig_1680006 (Not mapped)
MLOC_2630.1NoneAvailableNonecontig_1234930 (Not mapped)
MLOC_28342.1NoneAvailableNonecontig_190993 (Not mapped)
MLOC_30676.1NoneAvailableNonecontig_2117877 (Not mapped)
MLOC_30856.1NoneAvailableNonecontig_2133488 (Not mapped)
MLOC_40829.1NoneAvailableNonecontig_256529 (Mapped)
MLOC_46423.1NoneAvailableNonecontig_29007 (Not mapped)
MLOC_49059.1NoneAvailableNonecontig_33468 (Not mapped)
MLOC_49267.1NoneAvailableNonecontig_338798 (Mapped)
MLOC_52892.1NoneAvailableNonecontig_378873 (Not mapped)
MLOC_54702.1NoneAvailableNonecontig_393235 (Mapped)
MLOC_70914.1NoneAvailableAvailablecontig_58773 (Mapped)
MLOC_78399.1NoneAvailableNonecontig_800647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----