MLOC_49058 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.32879400.387797
LEAShoots from the seedlings (10 cm shoot stage)00.30410100.143365
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)8.1911322.881615.885416.6614
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_49058






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49058.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49058.1CUST_12611_PI427708083AvailableAvailablecontig_334672 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07410.2 -2 1e-17 81 36/54 (67%) 13107.m00723 protein oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
TAIR PP10None-----