- Predicted Gene MLOC_49033
MLOC_49033 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 51.5127 | 68.951 | 67.7845 | 57.823 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 48.7128 | 16.0316 | 13.111 | 19.7023 |
| INF1 | Young developing inflorescences (5mm) | 67.1891 | 62.7753 | 57.6124 | 52.2015 |
| INF2 | Developing inflorescences (1-1.5 cm) | 49.9494 | 57.0338 | 62.9035 | 59.8144 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.6596 | 39.1839 | 35.1258 | 35.6967 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.5598 | 13.4648 | 11.8198 | 26.2204 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 108.023 | 103.027 | 108.813 | 102.693 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 21.1056 | 16.4468 | 22.3392 | 45.3886 |
CDS Structure of MLOC_49033
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49033.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g73790.1 |
-1 |
8e-38 |
136 |
65/76 (86%) |
13101.m08055 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
| TAIR PP10 |
AT1G08200.1 |
-1 |
1e-31 |
118 |
54/75 (72%) |
| Symbols: AXS2 | UDP-D-apiose/UDP-D-xylose synthase 2 | chr1:2574259-2576609 REVERSE LENGTH=389 |