MLOC_4903 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.45374.271273.748733.65173
LEAShoots from the seedlings (10 cm shoot stage)3.056465.006944.867333.38777
INF1Young developing inflorescences (5mm)0.6427410.7749860.2793440.459141
INF2Developing inflorescences (1-1.5 cm)0.2339070.06585780.1595040.149857
ROORoots from the seedlings (10 cm shoot stage)11.472210.59548.0324511.6393
NODDeveloping tillers at six leaf stage, 3rd internode3.291792.883274.800169.95715
CAR5Developing grain, bracts removed (5 DPA)0.692760.7953830.7971830.660737
CAR15Developing grain, bracts removed (15 DPA)0.1531830.1598550.1807120.336764



CDS Structure of MLOC_4903






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4903.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4903.1CUST_12587_PI427708080AvailableAvailablecontig_135646 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13240.1 +1 0.0 989 484/587 (82%) 13103.m01534 protein peptide transporter, putative, expressed
TAIR PP10 AT2G02040.1 +1 0.0 770 370/583 (63%) | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | peptide transporter 2 | chr2:487542-489707 FORWARD LENGTH=585