MLOC_49010 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.584555.032314.655790
LEAShoots from the seedlings (10 cm shoot stage)4.647713.874412.587650
INF1Young developing inflorescences (5mm)22.515418.843220.93910
INF2Developing inflorescences (1-1.5 cm)25.680419.701314.33670
ROORoots from the seedlings (10 cm shoot stage)1.59022.197434.022310
NODDeveloping tillers at six leaf stage, 3rd internode0.8652690.8255661.517890
CAR5Developing grain, bracts removed (5 DPA)4.570284.594514.375660
CAR15Developing grain, bracts removed (15 DPA)0.5022880.3496330.4958910



CDS Structure of MLOC_49010






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372407
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372407CUST_22309_PI427708080NoneNoneNone
MLOC_22581.1NoneAvailableAvailablecontig_160882 (Mapped)
MLOC_41596.1NoneAvailableNonecontig_2596822 (Not mapped)
MLOC_48697.1NoneAvailableNonecontig_328075 (Not mapped)
MLOC_49010.1NoneAvailableNonecontig_333763 (Not mapped)
MLOC_76412.1NoneAvailableNonecontig_712818 (Not mapped)
MLOC_81069.1NoneAvailableNonecontig_9430 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----