MLOC_49000 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.413670.1698890.7909010.605787
LEAShoots from the seedlings (10 cm shoot stage)3.100312.538561.590521.69185
INF1Young developing inflorescences (5mm)1.178240.5191591.053340.604873
INF2Developing inflorescences (1-1.5 cm)0.3775040.2347720.8328090.392079
ROORoots from the seedlings (10 cm shoot stage)0.6547761.5889901.72674
NODDeveloping tillers at six leaf stage, 3rd internode0.9655641.152521.036612.76322
CAR5Developing grain, bracts removed (5 DPA)1.088240.7025170.3511350.595475
CAR15Developing grain, bracts removed (15 DPA)0.1827260.37611600.600916



CDS Structure of MLOC_49000






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK368181
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368181CUST_25204_PI427708080NoneNoneNone
MLOC_49000.1NoneAvailableAvailablecontig_333571 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----