- Predicted Gene MLOC_48989
MLOC_48989 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.4591 | 12.9334 | 14.7433 | 12.049 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.492 | 20.0631 | 15.3333 | 13.3861 |
| INF1 | Young developing inflorescences (5mm) | 6.07759 | 7.72838 | 6.31996 | 5.68351 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.98138 | 10.8349 | 14.0235 | 12.0809 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 39.55 | 24.1393 | 39.2716 | 28.8243 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.5557 | 20.2999 | 26.8639 | 52.7765 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.0661 | 15.9093 | 18.237 | 16.7734 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.78612 | 5.84081 | 4.63514 | 12.8652 |
CDS Structure of MLOC_48989
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48989.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g03140.1 |
-2 |
4e-41 |
140 |
91/104 (88%) |
13105.m00297 protein tetraspanin family protein, putative, expressed |
| TAIR PP10 |
AT3G45600.1 |
-2 |
4e-18 |
78 |
48/91 (53%) |
| Symbols: TET3 | tetraspanin3 | chr3:16733973-16735854 REVERSE LENGTH=285 |