MLOC_48982 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.490184.009321.471620
LEAShoots from the seedlings (10 cm shoot stage)3.469134.491113.816940
INF1Young developing inflorescences (5mm)4.982017.265648.837380
INF2Developing inflorescences (1-1.5 cm)13.48289.333558.145540
ROORoots from the seedlings (10 cm shoot stage)3.388593.753222.569160
NODDeveloping tillers at six leaf stage, 3rd internode0.9947083.025915.529230
CAR5Developing grain, bracts removed (5 DPA)5.057414.042994.146850
CAR15Developing grain, bracts removed (15 DPA)1.898463.389880.2880070



CDS Structure of MLOC_48982






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366750
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366750CUST_14239_PI427708083NoneNoneNone
MLOC_2745.1NoneAvailableNonecontig_12451 (Not mapped)
MLOC_29002.1NoneAvailableAvailablecontig_196560 (Mapped)
MLOC_33446.1NoneAvailableNonecontig_2374349 (Not mapped)
MLOC_35889.1NoneAvailableNonecontig_252519 (Mapped)
MLOC_42324.1NoneAvailableNonecontig_2637264 (Not mapped)
MLOC_47875.1NoneAvailableNonecontig_313794 (Not mapped)
MLOC_47897.1NoneAvailableNonecontig_31412 (Not mapped)
MLOC_48982.1NoneAvailableNonecontig_333254 (Not mapped)
MLOC_56476.1NoneAvailableNonecontig_40871 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----