MLOC_48974 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.6982613.497317.93030
LEAShoots from the seedlings (10 cm shoot stage)6.299766.322017.848610
INF1Young developing inflorescences (5mm)5.250328.64535.110780
INF2Developing inflorescences (1-1.5 cm)10.89644.679866.507840
ROORoots from the seedlings (10 cm shoot stage)6.730495.38024.153640
NODDeveloping tillers at six leaf stage, 3rd internode2.774142.86192.725240
CAR5Developing grain, bracts removed (5 DPA)19.604914.929922.58950
CAR15Developing grain, bracts removed (15 DPA)1.264741.3072400



CDS Structure of MLOC_48974






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357530
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357530CUST_19827_PI427708080NoneNoneNone
MLOC_22371.1NoneAvailableNonecontig_160601 (Mapped)
MLOC_27284.1NoneAvailableNonecontig_181902 (Mapped)
MLOC_31741.1NoneAvailableNonecontig_2218529 (Not mapped)
MLOC_33545.1NoneAvailableNonecontig_23837 (Not mapped)
MLOC_48974.1NoneAvailableNonecontig_33301 (Not mapped)
MLOC_5639.2NoneAvailableAvailablecontig_136489 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----