MLOC_48934 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2863932.03641.115220
LEAShoots from the seedlings (10 cm shoot stage)3.489892.354072.078260
INF1Young developing inflorescences (5mm)5.72652.416845.949770
INF2Developing inflorescences (1-1.5 cm)8.577147.231699.400960
ROORoots from the seedlings (10 cm shoot stage)03.365621.589330
NODDeveloping tillers at six leaf stage, 3rd internode0.3867361.623672.572110
CAR5Developing grain, bracts removed (5 DPA)1.835452.62615.624840
CAR15Developing grain, bracts removed (15 DPA)1.505461.847790.3230140



CDS Structure of MLOC_48934






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK376166
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376166CUST_14438_PI427708083NoneNoneNone
MLOC_48934.1NoneAvailableNonecontig_332249 (Mapped)
MLOC_50083.3NoneAvailableNonecontig_354078 (Mapped)
MLOC_53773.1NoneAvailableAvailablecontig_386345 (Not mapped)
MLOC_59628.1NoneAvailableNonecontig_437728 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----