MLOC_48925 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7491580.5022970.5516380.635103
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)1.567642.352432.672911.90735
INF2Developing inflorescences (1-1.5 cm)0.8906911.502271.110571.46056
ROORoots from the seedlings (10 cm shoot stage)0.1173220.5401970.8676220.718283
NODDeveloping tillers at six leaf stage, 3rd internode0.03336220.014753500.0727626
CAR5Developing grain, bracts removed (5 DPA)1.758781.915031.825771.90972
CAR15Developing grain, bracts removed (15 DPA)0.1538920.1193730.3414590.448706



CDS Structure of MLOC_48925






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48925.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48925.1CUST_12580_PI427708080AvailableAvailablecontig_332109 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g14090.1 -1 2e-74 243 185/287 (64%) 13101.m01551 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10None-----