- Predicted Gene MLOC_48910
MLOC_48910 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48910_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48910_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.69947 | 1.95441 | 1.63522 | 1.78763 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.56706 | 0.931636 | 0.58332 | 0.811166 |
INF1 | Young developing inflorescences (5mm) | 4.93842 | 6.43585 | 4.80431 | 4.70425 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.83146 | 6.66283 | 4.88574 | 6.74905 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.2839 | 1.67078 | 1.5357 | 1.79577 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.477762 | 0.679085 | 1.43065 | 2.16737 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.23434 | 2.00901 | 2.17215 | 2.13862 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.339018 | 0.303672 | 0.306749 | 0.728315 |
CDS Structure of MLOC_48910
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48910.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g66690.1 |
+2 |
0.0 |
1142 |
678/967 (70%) |
13101.m07218 protein ZIP4/SPO22, putative, expressed |
TAIR PP10 |
AT5G48390.1 |
+2 |
2e-179 |
553 |
364/940 (39%) |
| Symbols: ATZIP4 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19612078-19615363 FORWARD LENGTH=936 |