MLOC_48900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4392361.126320.6037340.507454
LEAShoots from the seedlings (10 cm shoot stage)0.2428490.7176880.7682030.319118
INF1Young developing inflorescences (5mm)0.5361550.1312870.1646970.208423
INF2Developing inflorescences (1-1.5 cm)0.1901160.532610.3870310.273924
ROORoots from the seedlings (10 cm shoot stage)0.2435211.342510.4607380.81708
NODDeveloping tillers at six leaf stage, 3rd internode00.02757330.03537250.103919
CAR5Developing grain, bracts removed (5 DPA)0.35753500.1372660.23767
CAR15Developing grain, bracts removed (15 DPA)0.699510.2824890.2051570.877521



CDS Structure of MLOC_48900






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48900.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48900.1CUST_7805_PI427708086AvailableAvailablecontig_331738 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----