- Predicted Gene MLOC_48870
MLOC_48870 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48870_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48870_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 202.004 | 104.826 | 115.851 | 98.3727 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 73.1378 | 40.7703 | 60.7134 | 36.7607 |
INF1 | Young developing inflorescences (5mm) | 194.046 | 217.338 | 245.309 | 117.185 |
INF2 | Developing inflorescences (1-1.5 cm) | 120.393 | 117.117 | 127.788 | 94.4702 |
ROO | Roots from the seedlings (10 cm shoot stage) | 139.023 | 103.292 | 131.871 | 89.3862 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.4137 | 19.488 | 59.0353 | 63.0846 |
CAR5 | Developing grain, bracts removed (5 DPA) | 81.1304 | 85.4896 | 90.9279 | 56.5208 |
CAR15 | Developing grain, bracts removed (15 DPA) | 25.8136 | 22.3827 | 20.4699 | 36.4934 |
CDS Structure of MLOC_48870
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48870.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g06310.1 |
-2 |
3e-27 |
110 |
51/52 (98%) |
13105.m00673 protein 60S ribosomal protein L18-3, putative, expressed |
TAIR PP10 |
AT3G05590.1 |
-2 |
1e-23 |
100 |
44/52 (85%) |
| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187 |