MLOC_4879 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.36243 | 11.4697 | 11.1027 | 10.1716 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.1437 | 9.76997 | 10.1059 | 8.31913 |
| INF1 | Young developing inflorescences (5mm) | 18.3024 | 21.0094 | 20.4697 | 16.763 |
| INF2 | Developing inflorescences (1-1.5 cm) | 21.828 | 24.0852 | 23.6504 | 25.0416 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.2938 | 12.0986 | 9.85421 | 13.5831 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.693 | 9.91705 | 9.46624 | 32.1852 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.6975 | 19.5471 | 19.9321 | 18.9771 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.6863 | 12.9352 | 14.6404 | 33.7568 |
CDS Structure of MLOC_4879
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4879.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g06550.1 |
-1 |
0.0 |
1489 |
671/838 (80%) |
13101.m00646 protein NF-X1-type zinc finger protein, putative, expressed |
| TAIR PP10 |
AT5G05660.1 |
-1 |
0.0 |
1010 |
470/838 (56%) |
| Symbols: ATNFXL2 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors | chr5:1691113-1695464 REVERSE LENGTH=880 |
