- Predicted Gene MLOC_48777
MLOC_48777 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48777_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48777_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 26.9858 | 24.5936 | 20.2895 | 28.4279 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.6734 | 0 | 2.07196 | 6.35789 |
INF1 | Young developing inflorescences (5mm) | 52.0445 | 58.6137 | 57.1259 | 59.4829 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.6032 | 41.2241 | 39.6647 | 52.2547 |
ROO | Roots from the seedlings (10 cm shoot stage) | 22.4199 | 15.3069 | 21.6817 | 24.0367 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.204969 | 0.159196 | 0.175941 | 0.558326 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.98432 | 10.0326 | 7.49279 | 10.8893 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.55639 | 0.251372 | 0 | 2.93986 |
CDS Structure of MLOC_48777
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48777.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g39410.1 |
-1 |
1e-41 |
135 |
67/73 (92%) |
13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G59970.1 |
-1 |
5e-42 |
135 |
67/73 (92%) |
Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103 |