MLOC_48762 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.9923040.2667711.41813
LEAShoots from the seedlings (10 cm shoot stage)0.6060760.7116641.076421.42847
INF1Young developing inflorescences (5mm)1.940863.375292.687043.93338
INF2Developing inflorescences (1-1.5 cm)2.856882.693761.689964.84159
ROORoots from the seedlings (10 cm shoot stage)0.4211611.378312.122152.32551
NODDeveloping tillers at six leaf stage, 3rd internode0.5296410.3234530.9992132.19721
CAR5Developing grain, bracts removed (5 DPA)1.152121.618883.37493.49877
CAR15Developing grain, bracts removed (15 DPA)0.8691191.63882.123445.2103



CDS Structure of MLOC_48762






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48762.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48762.1CUST_6881_PI427708083AvailableAvailablecontig_329141 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58080.1 +3 5e-24 95 60/91 (66%) 13104.m06092 protein polygalacturonase inhibitor 3 precursor, putative, expressed
TAIR PP10None-----